Nextflow workflow report

`[spontaneous-poitras]`

Workflow execution completed successfully. One or more tasks reported an error condition.

Run times

25-Nov-2022 21:16:25 - 25-Nov-2022 21:38:04 (duration: 21m 39s)

1126 succeeded

0 cached

6 ignored

6 failed

Nextflow command

nextflow run /input/pipelines/mag/ -name spontaneous-poitras --save_reference false --outdir /data/output -profile test

CPU-Hours: 4.8 (0.3% failed)
Launch directory: /data/launch
Work directory: /data/work
Project directory: /input/pipelines/mag
Script name: main.nf
Script ID: cab9063ac77682cdbef4e281111136ea
Workflow session: e83fa54f-099f-43aa-aa74-3b5cf3e7d8c3
Workflow profile: test
Nextflow version: version 22.09.7.edge, build 5807 (03-11-2022 15:46 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Raw Usage
% Allocated

Memory

Job Duration

Raw Usage
% Allocated

I/O

Read
Write

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)